TY - JOUR
T1 - High-dimensional quantitative structure-activity relationship modeling of influenza neuraminidase a/PR/8/34 (H1N1) inhibitors based on a two-stage adaptive penalized rank regression
AU - Algamal, Zakariya Yahya
AU - Lee, Muhammad Hisyam
AU - Al-Fakih, Abdo Mohammed
N1 - Publisher Copyright:
© 2015 John Wiley & Sons, Ltd.
PY - 2016/2/1
Y1 - 2016/2/1
N2 - Outliers in the biological activity variable or the heavy tailed distribution of the error are often encountered in practice. Under these circumstances, the quantittative structure-activity relationship (QSAR) model using multiple linear regression is not efficient. In this paper, a two-stage adaptive penalized rank regression is proposed for constructing a robust and efficient high-dimensional QSAR model of influenza virus neuraminidase A/PR/8/34 (H1N1) inhibitors. The results demonstrate the effectiveness of our proposed method in simultaneously estimating a robust QSAR model and selecting informative molecular descriptors. Furthermore, the results prove that the proposed method can significantly encourage the grouping effect. The proposed method, because of the high predictive ability and robustness, could be a useful method in high-dimensional QSAR modeling.
AB - Outliers in the biological activity variable or the heavy tailed distribution of the error are often encountered in practice. Under these circumstances, the quantittative structure-activity relationship (QSAR) model using multiple linear regression is not efficient. In this paper, a two-stage adaptive penalized rank regression is proposed for constructing a robust and efficient high-dimensional QSAR model of influenza virus neuraminidase A/PR/8/34 (H1N1) inhibitors. The results demonstrate the effectiveness of our proposed method in simultaneously estimating a robust QSAR model and selecting informative molecular descriptors. Furthermore, the results prove that the proposed method can significantly encourage the grouping effect. The proposed method, because of the high predictive ability and robustness, could be a useful method in high-dimensional QSAR modeling.
KW - Adaptive elastic net
KW - Influenza virus inhibitors
KW - Penalized method
KW - QSAR
KW - Rank regression
UR - http://www.scopus.com/inward/record.url?scp=84956940609&partnerID=8YFLogxK
U2 - 10.1002/cem.2766
DO - 10.1002/cem.2766
M3 - Article
AN - SCOPUS:84956940609
SN - 0886-9383
VL - 30
SP - 50
EP - 57
JO - Journal of Chemometrics
JF - Journal of Chemometrics
IS - 2
ER -