Maximum Likelihood Method on the Construction of Phylogenetic Tree for Identification the Spreading of SARS Epidemic

Siti Amiroch, M. Syaiful Pradana, M. Isa Irawan, Imam Mukhlash

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

1 Citation (Scopus)

Abstract

There are several phylogenetic tree construction methods that can be used to illustrate the spread of disease epidemics. One of the methods used is probability-based maximum likelihood. This paper explains how to identify the spread of the SARS epidemic in the world using the formation of phylogenetic trees using the maximum likelihood method. The output obtained was a description of the spread of SARS virus with the selection of tree candidates after performing a heuristic search of the Stepwise Addition method. The result of the research showed that the closest distance to the palm civet is GZ 02/18/03 indicating that the initial spread of the SARS epidemic started from Guangzhou.

Original languageEnglish
Title of host publicationProceeding - 2018 International Symposium on Advanced Intelligent Informatics
Subtitle of host publicationRevolutionize Intelligent Informatics Spectrum for Humanity, SAIN 2018
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages137-141
Number of pages5
ISBN (Electronic)9781538652800
DOIs
Publication statusPublished - 2 Jul 2018
Event2018 International Symposium on Advanced Intelligent Informatics, SAIN 2018 - Yogyakarta, Indonesia
Duration: 29 Aug 201830 Aug 2018

Publication series

NameProceeding - 2018 International Symposium on Advanced Intelligent Informatics: Revolutionize Intelligent Informatics Spectrum for Humanity, SAIN 2018

Conference

Conference2018 International Symposium on Advanced Intelligent Informatics, SAIN 2018
Country/TerritoryIndonesia
CityYogyakarta
Period29/08/1830/08/18

Keywords

  • SARS epidemic
  • maximum likelihood
  • phylogenetic tree

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